Mycobacterium tuberculosis/bovis/africanum/canettii cgMLST

Name	M. tuberculosis complex cgMLST
Version	2.1
Seed Genome	H37Rv (NC_000962.3, 22-DEC-2014)
Genus	Mycobacterium
Species	tuberculosis/bovis/africanum/canettii
Locus Count	2,891
Complex Type Distance	12
Complex Type Count	40,204
Last Change	Aug 16, 2025, 12:00 PM
Curator	S. Niemann, Research Center Borstel, Borstel, Germany
Publications	Kohl TA, Diel R, Harmsen D, Rothgänger J, Walter KM, Merker M, Weniger T, and Niemann S. Whole-genome-based Mycobacterium tuberculosis surveillance: a standardized, portable, and expandable approach. J. Clin. Microbiol. 2014, 52: 2479-86: 2479-86 [PubMed 24789177]
	Kohl TA, Harmsen D, Rothgänger J, Walker T, Diel R, and Niemann S. Harmonized Genome Wide Typing of Tubercle Bacilli Using a Web-Based Gene-By-Gene Nomenclature System. EBioMedicine. 2018, 34: 131-138 [PubMed 30115606]
Accessory Scheme	Mycobacterium tuberculosis/bovis/africanum/canettii Accessory