cgMLST.org Nomenclature Server

This server controls the allelic nomenclature of core genome MLST (cgMLST) bacterial gene schemes. Currently submission of new alleles and optional metadata is only possible by use of the SeqSphere+ software. A cgMLST scheme is a fixed and agreed upon number of genes for each species or group of closely related species that is ideally suited to standardize whole genome sequencing (WGS) based bacterial genotyping. By cgMLST very closely related genomes are 'lumped' together in a Complex Type (CT). In addition, this server controls the allelic nomenclature of the accessory genes of the species seed genomes.

We care about your privacy. Read our privacy policy.

SchemeTarget CountStrain Count
Acinetobacter baumannii cgMLST2,3904,756
Brucella melitensis cgMLST2,70488
Clostridioides difficile cgMLST2,2704,696
Enterococcus faecium cgMLST1,42310,834
Francisella tularensis cgMLST1,147240
Klebsiella pneumoniae/variicola/quasipneumoniae cgMLST2,3586,556
Legionella pneumophila cgMLST1,521863
Listeria monocytogenes cgMLST1,70119,799
Mycobacterium tuberculosis/bovis/africanum/canettii cgMLST2,89136,137
Mycoplasma gallisepticum cgMLST42565
Staphylococcus aureus cgMLST1,86122,270
 
 
Implemented and maintained by Ridom GmbH, Germany
Privacy Policy       Server Policy       Imprint